Leiden University was founded in 1575 and at its 15th anniversary it was gifted its own botanical garden by the city council. From the very start, both medicinal and ornamental plants were grown here for education and research. We know quite well which plants were cultivated at that time thanks to the Libri Picturati, a stunning collection of historical water colours 1. The species depicted were painted between 1565 and 1569 on request of botanist Karel van Sint-Omaars. One of his pupils was Charles d’Ecluse, the first prefect of Hortus botanicus Leiden. With help of the first hortulanus, Dirk Outgaertszn Cluyt, medicinal plants like spurge laurel (Daphne mezereum) were shown to the students and citizens of Leiden. Nowadays, this plant species is highly endangered in the Netherlands and part of a national conservation project.
Pictured below: Fruiting spurge laurel (photo by Willem Braam) and Clusius garden in 1712 (illustration by Pieter van der Aa).
In the first century of its existence, highlights of the living collection consisted of exotic ornamentals such as tulips and hyacinths, that were grown in a tight 40-square-meter space. During the next centuries, the botanical garden slowly expanded to its current size of 4,5 hectares. Its living collection nowadays encompasses over 6000 plant species from all over the world. Many of these, such as Laburnum (Laburnum anagyroides) from central and southern Europe, have been at this botanic garden right from the start. After the use of chemical pesticides was banned, this species was embraced by the local foodweb. Nowadays, local bumblebees visit the flowers, its leaves are consumed by local leaf miners, and its seeds by beetles 2. It is just one of the many exciting examples of exotic plants, that are being detected by native insects and other animals to become part of a newly evolving urban ecosystem.
Pictured below: Laburnum (Laburnum anagyroides) with buff-tailed bumblebee (Bombus terrestris) and broom seed beetle (Bruchidius villosus) in Hortus botanicus Leiden (photos by Duco de Vries and Udo Schmidt).
A unique foodweb
Due to climate change and a switch to nature-inclusive garden management, contacts between native animals and exotic plants intensified. Many animals can now survive here and not only as adult but also as egg, caterpillar, or nymph. As a result, a unique foodweb is starting to evolve.
Plants are at the heart of this foodweb. They are the producers and turn water and carbon dioxide into sunlight and sugars with the help of oxygen. Herbivores such as insects and snails eat plants. Carnivores such as newts, spiders, birds, wasps, and bats eat herbivores. Omnivores, such as beetles, eat both plants and animals. Fungi and worms are the detrivores: they break down all dead organic material and return nutrients to the soil. The first chains of this unique foodweb were detected with the naked eye. By now, hundreds of species have been discovered in and around the plant collection during national garden counts. The first new interactions among species from all over the world, that did not co-evolve together, have been documented 3-5.
Multimodal monitoring
To detect and quantify all species present and correlate these with types and frequency of garden maintenance, we need more than just a microscope, hand lens or binoculars. That is why we study the emerging food web using wild camera’s, audio-moths, and DNA-analyses. Data captured are being processed through automated species detection in collaboration with the Leiden Institute of Advanced Computer Science (LIACS), Naturalis Biodiversity Center, and others. Computer science students develop algorithms and interfaces to identify species and connect undescribed species to yet unexplored branches of DNA-based phylogenies. Colleagues of the Mathematical Institute offered their help with describing the food web with models to better understand interactions among players.
Pictured below: Wildlife camera (Reolink) capturing a treecreeper (Certhia brachydactyla) foraging on branches of one of the monumental snow pears (Pyrus nivalis) in Hortus botanicus Leiden (photographs by Barbara Gravendeel and Rogier van Vugt).
The need to reconnect with biodiversity
Hortus botanicus Leiden has been developing into an amazing hotspot of biodiversity over the past four and a half centuries. Sadly, this cannot be said for the surrounding city of Leiden. Due to ongoing urbanization and climate change, the areas around the botanic garden slowly changed into an unhealthy urban heat island. As a result, the citizens of Leiden became alienated from nature. We have the ambition to prevent endangered plant species from going extinct by reconnecting its 260.000 annual visitors with biodiversity as a healthy and enriching experience.
Promoting smelling wellness
Plants produce volatile defense compounds when attacked by herbivores, such as mealybugs or aphids. Surrounding plants, that are not yet attacked, detect the volatile compounds, and start to produce their own defense compounds. While walking through a botanic garden, you inhale all these volatile compounds. They give your immune system a boost and reduce the amounts of stress hormones 6. A walk of just half an hour is already sufficient. To make our visitors more aware of the invisible chains in the food web that stimulate plants to produce healthy volatile compounds, we are developing interactive games. By engaging our visitors in these games, we hope to make them more aware of the added value of nature-inclusive gardening and biodiversity on their own health.
Pictured below: Hortus Spotter game developed by MSc student Teun Bergsma.
Bending the curve of biodiversity decline
There are eight million private gardens in the Low Countries, which encompass a whopping total of 215000 hectares. This is 20 times more than our largest national nature reserves Hoge Veluwe and Hoge Kempen added up. If we design, connect, and maintain all these gardens in a nature-inclusive way, without the use of pesticides, artificial light, or automatic lawn mowers, we will be able to bend the curve of biodiversity decline.
A perfect way to connect private gardens is through hedges. In the Middle Ages, Europe was filled with hedges. Every farm was surrounded by one to keep livestock in and unwanted visitors out. People found their way with hedges and used them as place makers. Over the last century, most hedges disappeared from our landscapes, where they helped preventing soil erosion, maintaining water during periods of drought, shielding passengers from heavy winds, sun and rain, and housing natural enemies of pests, such as parasitoid wasps, insectivorous songbirds, and hedge hogs. People that coppiced hedges used the cuttings as firewood and fodder.
This upcoming winter, we will use the money that was kindly donated as CO2-compensation by participants of the 8th European Congress of Conservation Biology ECCB, to plant hedges full of endangered plant species along the Witte Singel and around our monumental trees. With multimodal monitoring, we will show our visitors over the upcoming decade how the food webs in these hedges will evolve. The coppiced wood will be left to decay to further improve our soils and offer substrate for wood-decaying fungi. With this initiative we hope to stimulate citizens to plant hedges in their own private gardens to help bending the curve of biodiversity decline.
Detailed budget overview
Please find below an overview of the main expenses.
Item
Expenses (in Euro)
Labour (hrs)
2500
Travel and transport costs
2000
Substrate (big bags)
650
Delivery costs
70
Digging by machine (1 day)
1000
Hedge plants (10 Euro per accession with locality data from local gene banks)
750
Information panel
1600
Outreach on hedges (construction, maintenance, guided tours, lectures)
1500
Dissemination (in NatureToday publications)
500
Total (excluding VAT)
10570
References
1 Koning J de, van Uffelen G, Zemanek A, Zemanek B. 2008. Drawn after Nature. The coplete botanical watercolours of the 16th-century Libri Picturati. KNNV Publishing.
6 Tucker MR et al. 2026. Smelling Wellness: Associations between botanic garden scentscapes and human health gains. International Journal of Environmental Research and Public Health 23(3): 304.
8th European Congress of Conservation Biology ECCB 6-10 July 2026 in Leiden, The Netherlands CO2-compensation project
prof. dr. Barbara Gravendeel scientific director/prefect of Hortus botanicus Leiden Plants & Society chair E-mail: b.gravendeel@hortus.leidenuniv.nl